Weird electrical problem
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Sounds like a regulator issue, is the one on the bike compatible with the engine?
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@Bluestoesonnose yes, it started to do this when i installed the new engine, i doubt it is the regulator, and that i might have done something wrong.
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I have had similar, but not identical issues, after faffing around with a rebuilt engine. Turned out the ignition switch loom had just completely corroded and was intermittent.
Trying to resolve this problem is difficult unless you know exactly what causes it. For me, it would work sometimes, ride the bike down the road and the YPVS would fail.
Once the bike was on, it was running, but the act of moving it unjarred a corroded cable.
Check to you haven't tugged one of the wires.
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@finnerz89 https://mtp-racing24.com/media/image/product/16642/lg/starter-relay-solenoid-yamaha.jpg there should be something there right?