Clutch
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I get this all the time. It's one of those problems I just live with. Not even sure if it's an actual issue with the bike, or just a side effect of having a manual gearbox that was designed more than 20 years ago..
I could be wrong, but I think generally the output shaft should be rotating slightly in order for you to change gear, so when you pull up to a stop, your output shaft / front sprocket is no longer rotating if you are in neutral, and so it may be a little harder to change gear.